Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Gm11618-201ENSMUST00000117946 267 ntBASIC10.27□□□□□ -0.77
CfdP03953 Gm13616-201ENSMUST00000120600 222 ntBASIC10.27□□□□□ -0.77
CfdP03953 Gm14719-201ENSMUST00000121891 340 ntBASIC10.27□□□□□ -0.77
CfdP03953 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.27□□□□□ -0.77
CfdP03953 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.27□□□□□ -0.77
CfdP03953 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CfdP03953 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.27□□□□□ -0.77
CfdP03953 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.27□□□□□ -0.77
CfdP03953 Gm18307-201ENSMUST00000206864 949 ntBASIC10.27□□□□□ -0.77
CfdP03953 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
CfdP03953 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.27□□□□□ -0.77
CfdP03953 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CfdP03953 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Cog3-203ENSMUST00000227473 4197 ntBASIC10.27□□□□□ -0.77
CfdP03953 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.27□□□□□ -0.77
CfdP03953 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CfdP03953 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm15429-201ENSMUST00000151268 798 ntBASIC10.26□□□□□ -0.77
CfdP03953 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Rmrp-201ENSMUST00000157463 271 ntBASIC10.26□□□□□ -0.77
CfdP03953 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.26□□□□□ -0.77
CfdP03953 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.26□□□□□ -0.77
CfdP03953 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
CfdP03953 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.26□□□□□ -0.77
CfdP03953 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.26□□□□□ -0.77
CfdP03953 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CfdP03953 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.26□□□□□ -0.77
CfdP03953 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms