Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Gm11783-201ENSMUST00000119549 885 ntBASIC14.83□□□□□ -0.04
Col4a1P02463 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.83□□□□□ -0.04
Col4a1P02463 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.83□□□□□ -0.04
Col4a1P02463 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col4a1P02463 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Col4a1P02463 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.83□□□□□ -0.04
Col4a1P02463 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Gm15610-201ENSMUST00000120584 195 ntBASIC14.82□□□□□ -0.04
Col4a1P02463 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col4a1P02463 Gm9358-201ENSMUST00000183067 927 ntBASIC14.82□□□□□ -0.04
Col4a1P02463 Gm2875-201ENSMUST00000211333 360 ntBASIC14.82□□□□□ -0.04
Col4a1P02463 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col4a1P02463 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col4a1P02463 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.82□□□□□ -0.04
Col4a1P02463 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col4a1P02463 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Col4a1P02463 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.82□□□□□ -0.04
Col4a1P02463 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col4a1P02463 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col4a1P02463 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm7150-201ENSMUST00000122032 981 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 Gm6450-201ENSMUST00000200896 574 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm44506-201ENSMUST00000206278 965 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col4a1P02463 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.81□□□□□ -0.04
Col4a1P02463 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Col4a1P02463 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Col4a1P02463 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col4a1P02463 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
Col4a1P02463 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm12030-201ENSMUST00000121917 223 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 Gm14441-201ENSMUST00000121960 540 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.81□□□□□ -0.04
Col4a1P02463 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.81□□□□□ -0.04
Col4a1P02463 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col4a1P02463 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col4a1P02463 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.8□□□□□ -0.04
Col4a1P02463 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.8□□□□□ -0.04
Col4a1P02463 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.8□□□□□ -0.04
Col4a1P02463 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Col4a1P02463 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col4a1P02463 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col4a1P02463 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col4a1P02463 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms