Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.68□□□□□ -0.38
CopeO89079 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CopeO89079 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CopeO89079 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CopeO89079 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.68□□□□□ -0.38
CopeO89079 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CopeO89079 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.67□□□□□ -0.38
CopeO89079 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.67□□□□□ -0.38
CopeO89079 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CopeO89079 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CopeO89079 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CopeO89079 Gm11918-201ENSMUST00000121660 179 ntBASIC12.67□□□□□ -0.38
CopeO89079 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Gm24196-201ENSMUST00000179161 110 ntBASIC12.67□□□□□ -0.38
CopeO89079 Gm8515-201ENSMUST00000194852 576 ntBASIC12.67□□□□□ -0.38
CopeO89079 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.67□□□□□ -0.38
CopeO89079 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.67□□□□□ -0.38
CopeO89079 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.67□□□□□ -0.38
CopeO89079 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CopeO89079 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopeO89079 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.66□□□□□ -0.38
CopeO89079 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.66□□□□□ -0.38
CopeO89079 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CopeO89079 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CopeO89079 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CopeO89079 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CopeO89079 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CopeO89079 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm17794-201ENSMUST00000220252 955 ntBASIC12.66□□□□□ -0.38
CopeO89079 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm5356-201ENSMUST00000093326 615 ntBASIC12.66□□□□□ -0.38
CopeO89079 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.66□□□□□ -0.38
CopeO89079 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CopeO89079 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.66□□□□□ -0.38
CopeO89079 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopeO89079 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.66□□□□□ -0.38
CopeO89079 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.65□□□□□ -0.38
CopeO89079 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopeO89079 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms