Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Hcn1O88704 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hcn1O88704 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hcn1O88704 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hcn1O88704 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.81□□□□□ -0.52
Hcn1O88704 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.81□□□□□ -0.52
Hcn1O88704 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hcn1O88704 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hcn1O88704 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.81□□□□□ -0.52
Hcn1O88704 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hcn1O88704 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.81□□□□□ -0.52
Hcn1O88704 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hcn1O88704 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.81□□□□□ -0.52
Hcn1O88704 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.81□□□□□ -0.52
Hcn1O88704 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Hcn1O88704 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcn1O88704 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.8□□□□□ -0.52
Hcn1O88704 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Gm24548-201ENSMUST00000158650 108 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.8□□□□□ -0.52
Hcn1O88704 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Gm8738-201ENSMUST00000172606 329 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Gm6007-201ENSMUST00000208170 823 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.8□□□□□ -0.52
Hcn1O88704 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.8□□□□□ -0.52
Hcn1O88704 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Mir339-201ENSMUST00000083659 96 ntBASIC11.8□□□□□ -0.52
Hcn1O88704 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hcn1O88704 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcn1O88704 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.79□□□□□ -0.52
Hcn1O88704 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms