Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.2□□□□□ -0.46
Pdlim1O70400 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Gm13097-201ENSMUST00000210722 397 ntBASIC12.2□□□□□ -0.46
Pdlim1O70400 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.2□□□□□ -0.46
Pdlim1O70400 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.2□□□□□ -0.46
Pdlim1O70400 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pdlim1O70400 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim1O70400 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pdlim1O70400 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pdlim1O70400 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm14644-201ENSMUST00000116671 647 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm13350-201ENSMUST00000120519 479 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.19□□□□□ -0.46
Pdlim1O70400 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm25668-201ENSMUST00000157700 129 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm4034-201ENSMUST00000187674 480 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm18711-201ENSMUST00000199341 750 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm19994-201ENSMUST00000217086 586 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.19□□□□□ -0.46
Pdlim1O70400 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.19□□□□□ -0.46
Pdlim1O70400 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim1O70400 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm27390-201ENSMUST00000184516 176 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm9230-201ENSMUST00000188228 532 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.18□□□□□ -0.46
Pdlim1O70400 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pdlim1O70400 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pdlim1O70400 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms