Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Gm9396-201ENSMUST00000076703 567 ntBASIC12.45□□□□□ -0.42
ChkaO54804 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.45□□□□□ -0.42
ChkaO54804 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ChkaO54804 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.44□□□□□ -0.42
ChkaO54804 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.44□□□□□ -0.42
ChkaO54804 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.44□□□□□ -0.42
ChkaO54804 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.44□□□□□ -0.42
ChkaO54804 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.44□□□□□ -0.42
ChkaO54804 Gm27731-201ENSMUST00000185192 107 ntBASIC12.44□□□□□ -0.42
ChkaO54804 Gm4034-201ENSMUST00000187674 480 ntBASIC12.44□□□□□ -0.42
ChkaO54804 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ChkaO54804 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.44□□□□□ -0.42
ChkaO54804 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.44□□□□□ -0.42
ChkaO54804 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.44□□□□□ -0.42
ChkaO54804 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.44□□□□□ -0.42
ChkaO54804 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ChkaO54804 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ChkaO54804 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ChkaO54804 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Gm13342-201ENSMUST00000121055 207 ntBASIC12.43□□□□□ -0.42
ChkaO54804 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.43□□□□□ -0.42
ChkaO54804 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.43□□□□□ -0.42
ChkaO54804 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
ChkaO54804 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.43□□□□□ -0.42
ChkaO54804 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.43□□□□□ -0.42
ChkaO54804 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Snora73a-201ENSMUST00000082453 205 ntBASIC12.43□□□□□ -0.42
ChkaO54804 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ChkaO54804 Cog3-203ENSMUST00000227473 4197 ntBASIC12.43□□□□□ -0.42
ChkaO54804 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ChkaO54804 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.43□□□□□ -0.42
ChkaO54804 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ChkaO54804 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
ChkaO54804 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.43□□□□□ -0.42
ChkaO54804 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.42□□□□□ -0.42
ChkaO54804 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ChkaO54804 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.42□□□□□ -0.42
ChkaO54804 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ChkaO54804 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms