Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.67□□□□□ -0.38
Trove2O08848 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trove2O08848 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Trove2O08848 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.66□□□□□ -0.38
Trove2O08848 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Gm11978-201ENSMUST00000122315 466 ntBASIC12.66□□□□□ -0.38
Trove2O08848 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trove2O08848 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.66□□□□□ -0.38
Trove2O08848 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trove2O08848 Gm17794-201ENSMUST00000220252 955 ntBASIC12.66□□□□□ -0.38
Trove2O08848 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.66□□□□□ -0.38
Trove2O08848 Gm8227-201ENSMUST00000223306 571 ntBASIC12.66□□□□□ -0.38
Trove2O08848 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trove2O08848 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trove2O08848 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.66□□□□□ -0.38
Trove2O08848 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trove2O08848 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.65□□□□□ -0.38
Trove2O08848 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm12490-201ENSMUST00000120255 560 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm12138-201ENSMUST00000122180 951 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trove2O08848 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Gm9002-201ENSMUST00000178437 499 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.65□□□□□ -0.38
Trove2O08848 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.65□□□□□ -0.38
Trove2O08848 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.65□□□□□ -0.38
Trove2O08848 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trove2O08848 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms