Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ccdc188F6WEU2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm7150-201ENSMUST00000122032 981 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm37826-201ENSMUST00000195329 322 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm5451-201ENSMUST00000080545 579 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Olfr584-201ENSMUST00000098210 964 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc188F6WEU2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Mir432-201ENSMUST00000157230 75 ntBASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm9081-201ENSMUST00000182346 991 ntBASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm7627-201ENSMUST00000183205 999 ntBASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm39288-201ENSMUST00000210554 446 ntBASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm23105-201ENSMUST00000083719 134 ntBASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc188F6WEU2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Gm12986-201ENSMUST00000119037 967 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms