Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm14153-201ENSMUST00000119923 1139 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm6291-201ENSMUST00000179994 309 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm37597-201ENSMUST00000191853 382 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 CT009713.2-201ENSMUST00000225532 1149 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 AC102327.1-201ENSMUST00000226389 742 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm24146-201ENSMUST00000082760 321 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Mir675-201ENSMUST00000102320 84 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm13777-201ENSMUST00000118208 345 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm5808-201ENSMUST00000178090 357 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm22341-201ENSMUST00000083775 129 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm7790-201ENSMUST00000118716 1310 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm24597-201ENSMUST00000122503 300 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Gm42402-201ENSMUST00000208341 1054 ntBASIC6.64□□□□□ -1.35
Herc1E9PZP8 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Herc1E9PZP8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm15207-201ENSMUST00000119259 442 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm5845-201ENSMUST00000195812 796 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm42872-201ENSMUST00000200026 1967 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm22937-201ENSMUST00000103954 131 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC6.63□□□□□ -1.35
Herc1E9PZP8 n-R5s130-201ENSMUST00000178128 119 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 Gm24312-201ENSMUST00000178677 119 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 n-R5s106-201ENSMUST00000179060 119 ntBASIC6.63□□□□□ -1.35
Herc1E9PZP8 n-R5s118-201ENSMUST00000179887 119 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms