Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Srp54bE9PXC0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm28071-201ENSMUST00000190355 478 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm19994-201ENSMUST00000217086 586 ntBASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Srp54bE9PXC0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm23949-201ENSMUST00000104027 127 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm15711-201ENSMUST00000118889 535 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm12380-201ENSMUST00000119012 544 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm11331-201ENSMUST00000119764 288 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm23119-201ENSMUST00000158610 140 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Srp54bE9PXC0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms