Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm11597-201ENSMUST00000121423 964 ntBASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm8018-201ENSMUST00000173536 789 ntBASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm24196-201ENSMUST00000179161 110 ntBASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Mir6977-201ENSMUST00000184960 64 ntBASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav12d-1A0N8R0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm9083-201ENSMUST00000120423 819 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm25927-201ENSMUST00000175058 117 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm17794-201ENSMUST00000220252 955 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm2423-201ENSMUST00000074863 733 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav12d-1A0N8R0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms