Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc194A0A140LIT1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm13315-201ENSMUST00000120376 991 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm44405-201ENSMUST00000198952 126 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc194A0A140LIT1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc194A0A140LIT1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.22□□□□□ -0.45
Ccdc194A0A140LIT1 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms