Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gm10040-201ENSMUST00000080726 1662 ntBASIC8.81□□□□□ -1
Trav8-1A0A075B641 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm9466-201ENSMUST00000218144 2246 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm25144-201ENSMUST00000179561 110 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm25352-201ENSMUST00000179815 110 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm27533-201ENSMUST00000183800 152 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm27525-201ENSMUST00000184465 107 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm35960-201ENSMUST00000202712 767 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm17870-201ENSMUST00000219489 1174 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm8227-201ENSMUST00000223306 571 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm26035-201ENSMUST00000083065 308 ntBASIC8.8□□□□□ -1
Trav8-1A0A075B641 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav8-1A0A075B641 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms