Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm5279-201ENSMUST00000199575 745 ntBASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav7n-4A0A075B620 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Mir449b-201ENSMUST00000104833 80 ntBASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav7n-4A0A075B620 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Btrc-209ENSMUST00000224478 2194 ntBASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav7n-4A0A075B620 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav7n-4A0A075B620 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms