Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Gm31256-201ENSMUST00000194705 506 ntBASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.21□□□□□ -0.61
Clcf1Q9QZM3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Clcf1Q9QZM3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm6082-201ENSMUST00000215204 454 ntBASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Clcf1Q9QZM3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms