Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm4482-201ENSMUST00000200876 742 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm4157-201ENSMUST00000211647 679 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm8956-201ENSMUST00000203939 825 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.16□□□□□ -0.46
OtofQ9ESF1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
OtofQ9ESF1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Mir7677-201ENSMUST00000184226 67 ntBASIC12.15□□□□□ -0.46
OtofQ9ESF1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Gm43184-201ENSMUST00000197247 542 ntBASIC12.15□□□□□ -0.46
OtofQ9ESF1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
OtofQ9ESF1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
OtofQ9ESF1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
OtofQ9ESF1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
OtofQ9ESF1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
OtofQ9ESF1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
OtofQ9ESF1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
OtofQ9ESF1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
OtofQ9ESF1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Gm13611-201ENSMUST00000118269 318 ntBASIC12.14□□□□□ -0.47
OtofQ9ESF1 Gm14724-201ENSMUST00000118400 537 ntBASIC12.14□□□□□ -0.47
OtofQ9ESF1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.14□□□□□ -0.47
OtofQ9ESF1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.14□□□□□ -0.47
OtofQ9ESF1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.14□□□□□ -0.47
OtofQ9ESF1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
OtofQ9ESF1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms