Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.19■□□□□ 0.18
U2af1Q9D883 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.19■□□□□ 0.18
U2af1Q9D883 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Gm14208-201ENSMUST00000119645 678 ntBASIC16.18■□□□□ 0.18
U2af1Q9D883 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Rprl1-201ENSMUST00000158050 327 ntBASIC16.18■□□□□ 0.18
U2af1Q9D883 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.18■□□□□ 0.18
U2af1Q9D883 AC098716.1-201ENSMUST00000213527 703 ntBASIC16.18■□□□□ 0.18
U2af1Q9D883 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
U2af1Q9D883 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
U2af1Q9D883 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.17■□□□□ 0.18
U2af1Q9D883 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.17■□□□□ 0.18
U2af1Q9D883 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.17■□□□□ 0.18
U2af1Q9D883 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
U2af1Q9D883 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
U2af1Q9D883 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Ntrk2-204ENSMUST00000224259 3049 ntBASIC16.16■□□□□ 0.18
U2af1Q9D883 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
U2af1Q9D883 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Gm24990-201ENSMUST00000157406 323 ntBASIC16.16■□□□□ 0.18
U2af1Q9D883 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Gm17812-201ENSMUST00000204935 318 ntBASIC16.16■□□□□ 0.18
U2af1Q9D883 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Gm18212-201ENSMUST00000211678 889 ntBASIC16.16■□□□□ 0.18
U2af1Q9D883 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.16■□□□□ 0.18
U2af1Q9D883 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms