Protein–RNA interactions for Protein: Q9D0Z3

Tmem53, Transmembrane protein 53, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem53Q9D0Z3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm6023-201ENSMUST00000118217 606 ntBASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm7809-201ENSMUST00000153199 742 ntBASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tmem53Q9D0Z3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm18584-201ENSMUST00000203098 964 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm18935-201ENSMUST00000212692 664 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm10608-202ENSMUST00000213924 676 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.91□□□□□ -0.5
Tmem53Q9D0Z3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tmem53Q9D0Z3 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms