Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Snf8Q9CZ28 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Gm11597-201ENSMUST00000121423 964 ntBASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Gm9002-201ENSMUST00000178437 499 ntBASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Gm6007-201ENSMUST00000208170 823 ntBASIC12.67□□□□□ -0.38
Snf8Q9CZ28 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Snf8Q9CZ28 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms