Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm5781-201ENSMUST00000219792 443 ntBASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm9083-201ENSMUST00000120423 819 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm17150-201ENSMUST00000165577 381 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm8738-201ENSMUST00000172606 329 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm4034-201ENSMUST00000187674 480 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Snora73a-201ENSMUST00000082453 205 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
H2afb1Q9CQ70 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms