Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.67□□□□□ -0.54
Ska1Q9CPV1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Gm13123-201ENSMUST00000122173 492 ntBASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ska1Q9CPV1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Gm26185-201ENSMUST00000157692 266 ntBASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Gm27486-201ENSMUST00000184923 80 ntBASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Gm8099-201ENSMUST00000200510 742 ntBASIC11.66□□□□□ -0.54
Ska1Q9CPV1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.66□□□□□ -0.54
Ska1Q9CPV1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ska1Q9CPV1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ska1Q9CPV1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms