Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Msh4Q99MT2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msh4Q99MT2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.02□□□□□ -0.48
Msh4Q99MT2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Msh4Q99MT2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msh4Q99MT2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msh4Q99MT2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Msh4Q99MT2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm10434-201ENSMUST00000101158 471 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm2991-201ENSMUST00000173338 480 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm44364-201ENSMUST00000198368 141 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msh4Q99MT2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.01□□□□□ -0.49
Msh4Q99MT2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm6621-201ENSMUST00000193251 772 ntBASIC12.01□□□□□ -0.49
Msh4Q99MT2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Morn2-202ENSMUST00000227729 656 ntBASIC12.01□□□□□ -0.49
Msh4Q99MT2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm24526-201ENSMUST00000082921 158 ntBASIC12.01□□□□□ -0.49
Msh4Q99MT2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.01□□□□□ -0.49
Msh4Q99MT2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msh4Q99MT2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12□□□□□ -0.49
Msh4Q99MT2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms