Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col25a1Q99MQ5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm29410-201ENSMUST00000188383 694 ntBASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm45594-201ENSMUST00000211717 241 ntBASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col25a1Q99MQ5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm22146-201ENSMUST00000157397 288 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm23085-201ENSMUST00000157849 293 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Mir7221-201ENSMUST00000184009 72 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Mir7677-201ENSMUST00000184226 67 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm270-201ENSMUST00000223010 976 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col25a1Q99MQ5 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col25a1Q99MQ5 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms