Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm13315-201ENSMUST00000120376 991 ntBASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm6007-201ENSMUST00000208170 823 ntBASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdk5rap3Q99LM2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdk5rap3Q99LM2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Gm27682-201ENSMUST00000183930 110 ntBASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cdk5rap3Q99LM2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm12502-201ENSMUST00000120197 444 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm16177-201ENSMUST00000120728 718 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms