Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm9908-201ENSMUST00000211534 448 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm5186-201ENSMUST00000218781 920 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Mir339-201ENSMUST00000083659 96 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk9Q99J95 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.42□□□□□ -0.42
Cdk9Q99J95 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.42□□□□□ -0.42
Cdk9Q99J95 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 BC043934-202ENSMUST00000185694 2356 ntBASIC12.42□□□□□ -0.42
Cdk9Q99J95 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.42□□□□□ -0.42
Cdk9Q99J95 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk9Q99J95 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.41□□□□□ -0.42
Cdk9Q99J95 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk9Q99J95 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.41□□□□□ -0.42
Cdk9Q99J95 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms