Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Gm7783-201ENSMUST00000204795 781 ntBASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdha3Q91Y16 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm43758-201ENSMUST00000199500 367 ntBASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdha3Q91Y16 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Gm30285-201ENSMUST00000214614 422 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Pcdha3Q91Y16 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms