Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb8Q91XZ2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm5370-201ENSMUST00000187187 574 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm37008-201ENSMUST00000195712 319 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm43433-201ENSMUST00000196573 481 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb8Q91XZ2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.04□□□□□ -0.48
Pcdhb8Q91XZ2 Snora78-201ENSMUST00000158630 128 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms