Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Usb1Q91W78 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Usb1Q91W78 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Gm11222-201ENSMUST00000119005 738 ntBASIC12.24□□□□□ -0.45
Usb1Q91W78 Gm11964-201ENSMUST00000120982 444 ntBASIC12.24□□□□□ -0.45
Usb1Q91W78 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.24□□□□□ -0.45
Usb1Q91W78 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Gm38341-201ENSMUST00000195357 515 ntBASIC12.24□□□□□ -0.45
Usb1Q91W78 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.24□□□□□ -0.45
Usb1Q91W78 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Gm9257-201ENSMUST00000221254 232 ntBASIC12.24□□□□□ -0.45
Usb1Q91W78 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Usb1Q91W78 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usb1Q91W78 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm45865-201ENSMUST00000211815 945 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm21769-201ENSMUST00000211922 111 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Cts7-204ENSMUST00000225321 1257 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Morn2-202ENSMUST00000227729 656 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.23□□□□□ -0.45
Usb1Q91W78 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usb1Q91W78 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usb1Q91W78 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usb1Q91W78 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms