Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Usp3Q91W36 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp3Q91W36 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Gm15276-201ENSMUST00000145953 498 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Gm17983-201ENSMUST00000190766 594 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Gm44967-201ENSMUST00000207047 631 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.79□□□□□ -0.36
Usp3Q91W36 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp3Q91W36 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp3Q91W36 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Usp3Q91W36 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm14644-201ENSMUST00000116671 647 ntBASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm15808-201ENSMUST00000119046 604 ntBASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm14301-201ENSMUST00000120181 324 ntBASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp3Q91W36 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.78□□□□□ -0.36
Usp3Q91W36 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp3Q91W36 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.78□□□□□ -0.36
Usp3Q91W36 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp3Q91W36 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.77□□□□□ -0.36
Usp3Q91W36 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Usp3Q91W36 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.77□□□□□ -0.36
Usp3Q91W36 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
Usp3Q91W36 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms