Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Gm9630-201ENSMUST00000178304 885 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q8VDP2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q8VDP2 Gm8036-201ENSMUST00000118089 1718 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Q8VDP2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Q8VDP2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q8VDP2 Gm17980-201ENSMUST00000217977 2349 ntBASIC12.02□□□□□ -0.49
Q8VDP2 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.01□□□□□ -0.49
Q8VDP2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Q8VDP2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.01□□□□□ -0.49
Q8VDP2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.01□□□□□ -0.49
Q8VDP2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.01□□□□□ -0.49
Q8VDP2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.01□□□□□ -0.49
Q8VDP2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 Gm20949-201ENSMUST00000206478 952 ntBASIC12.01□□□□□ -0.49
Q8VDP2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.01□□□□□ -0.49
Q8VDP2 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.01□□□□□ -0.49
Q8VDP2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Gm45597-201ENSMUST00000211524 1994 ntBASIC12.01□□□□□ -0.49
Q8VDP2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.01□□□□□ -0.49
Q8VDP2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.01□□□□□ -0.49
Q8VDP2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q8VDP2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Q8VDP2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Q8VDP2 Gm42971-201ENSMUST00000199228 2079 ntBASIC12□□□□□ -0.49
Q8VDP2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12□□□□□ -0.49
Q8VDP2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Gm12882-201ENSMUST00000121696 517 ntBASIC12□□□□□ -0.49
Q8VDP2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12□□□□□ -0.49
Q8VDP2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12□□□□□ -0.49
Q8VDP2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12□□□□□ -0.49
Q8VDP2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Q8VDP2 Gm44608-201ENSMUST00000206827 855 ntBASIC12□□□□□ -0.49
Q8VDP2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12□□□□□ -0.49
Q8VDP2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Q8VDP2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms