Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm24990-201ENSMUST00000157406 323 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm26361-201ENSMUST00000158868 186 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Mir3102-201ENSMUST00000175555 104 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm25700-201ENSMUST00000177693 110 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm2260-201ENSMUST00000184965 657 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm18212-201ENSMUST00000211678 889 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm10312-201ENSMUST00000078515 489 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ndc1Q8VCB1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm14832-201ENSMUST00000121289 322 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm24845-201ENSMUST00000158034 109 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm16505-201ENSMUST00000179981 232 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Gm10076-201ENSMUST00000073238 384 ntBASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ndc1Q8VCB1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.55
Ndc1Q8VCB1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms