Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm12390-201ENSMUST00000117897 397 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm7809-201ENSMUST00000153199 742 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm3890-201ENSMUST00000182416 207 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Gm40466-201ENSMUST00000212174 422 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm1Q8VC85 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm44958-201ENSMUST00000203734 736 ntBASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lsm1Q8VC85 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm1Q8VC85 Gm13342-201ENSMUST00000121055 207 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms