Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm18304-201ENSMUST00000189162 546 ntBASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Gm10076-201ENSMUST00000073238 384 ntBASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ubqln1Q8R317 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm18054-201ENSMUST00000207539 555 ntBASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ubqln1Q8R317 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ubqln1Q8R317 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm11793-201ENSMUST00000120433 981 ntBASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ubqln1Q8R317 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms