Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.06□□□□□ -0.48
Rab43Q8CG50 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab43Q8CG50 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.05□□□□□ -0.48
Rab43Q8CG50 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.05□□□□□ -0.48
Rab43Q8CG50 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.05□□□□□ -0.48
Rab43Q8CG50 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.05□□□□□ -0.48
Rab43Q8CG50 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.05□□□□□ -0.48
Rab43Q8CG50 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab43Q8CG50 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Gm13408-201ENSMUST00000119822 798 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Gm13935-201ENSMUST00000121859 798 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Gm23119-201ENSMUST00000158610 140 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.04□□□□□ -0.48
Rab43Q8CG50 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rab43Q8CG50 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms