Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Gm24231-201ENSMUST00000104315 133 ntBASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Gm16296-201ENSMUST00000159905 325 ntBASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc28bQ8CEG5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Ccdc28bQ8CEG5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms