Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim52Q8CDV4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim52Q8CDV4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim52Q8CDV4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim52Q8CDV4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim52Q8CDV4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim52Q8CDV4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm15131-201ENSMUST00000119124 595 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm17391-201ENSMUST00000171036 126 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm17931-201ENSMUST00000208132 634 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gm10179-201ENSMUST00000086233 688 ntBASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim52Q8CDV4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm13263-201ENSMUST00000121271 838 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm19459-201ENSMUST00000176240 835 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm4310-201ENSMUST00000177847 889 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm45575-201ENSMUST00000210283 548 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim52Q8CDV4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.12■□□□□ 0.01
Trim52Q8CDV4 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim52Q8CDV4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim52Q8CDV4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms