Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gm12363-201ENSMUST00000122250 668 ntBASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gm8515-201ENSMUST00000194852 576 ntBASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lysmd4Q8CC84 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm11803-201ENSMUST00000119966 444 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm11597-201ENSMUST00000121423 964 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm7287-201ENSMUST00000205267 602 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm4768-201ENSMUST00000206199 686 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lysmd4Q8CC84 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms