Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Gm11451-201ENSMUST00000118946 630 ntBASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Gm37028-201ENSMUST00000194276 107 ntBASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.12□□□□□ -0.63
Col6a6Q8C6K9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm22144-201ENSMUST00000157402 102 ntBASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Mir1956-201ENSMUST00000157748 65 ntBASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a6Q8C6K9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm23045-201ENSMUST00000175041 96 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm21092-201ENSMUST00000178995 955 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.1□□□□□ -0.63
Col6a6Q8C6K9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms