Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm11618-201ENSMUST00000117946 267 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm27331-201ENSMUST00000183705 60 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm43818-201ENSMUST00000200605 466 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm44069-201ENSMUST00000204898 506 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm6458-201ENSMUST00000211573 635 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Gm29705-201ENSMUST00000212598 474 ntBASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.05□□□□□ -0.64
Rft1Q8C3B8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Gm45784-201ENSMUST00000188360 142 ntBASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Gm37922-201ENSMUST00000195596 455 ntBASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Gm44124-201ENSMUST00000204159 472 ntBASIC11.04□□□□□ -0.64
Rft1Q8C3B8 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rft1Q8C3B8 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rft1Q8C3B8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms