Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm7851-201ENSMUST00000117574 323 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm12314-201ENSMUST00000118104 538 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm7666-201ENSMUST00000146631 819 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Mir7677-201ENSMUST00000184226 67 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm37319-201ENSMUST00000193500 636 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ptcd1Q8C2E4 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm22133-201ENSMUST00000102082 109 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm11340-201ENSMUST00000119226 412 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm15881-201ENSMUST00000148792 942 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm28324-201ENSMUST00000187913 264 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Ginm1-202ENSMUST00000065124 300 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ptcd1Q8C2E4 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms