Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm23912-201ENSMUST00000104687 87 ntBASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm13296-201ENSMUST00000117854 997 ntBASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm45224-201ENSMUST00000208203 414 ntBASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup54Q8BTS4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Gm4034-201ENSMUST00000187674 480 ntBASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Gm18711-201ENSMUST00000199341 750 ntBASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nup54Q8BTS4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm11989-201ENSMUST00000117240 672 ntBASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm14130-201ENSMUST00000118417 987 ntBASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm11362-201ENSMUST00000118838 850 ntBASIC12.59□□□□□ -0.39
Nup54Q8BTS4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms