Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scfd1Q8BRF7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scfd1Q8BRF7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scfd1Q8BRF7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scfd1Q8BRF7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Gm13035-201ENSMUST00000117496 342 ntBASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Gm807-202ENSMUST00000224929 408 ntBASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scfd1Q8BRF7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm14058-201ENSMUST00000116082 735 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm12501-201ENSMUST00000119163 529 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm23699-201ENSMUST00000158835 135 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm4034-201ENSMUST00000187674 480 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm3332-201ENSMUST00000189337 928 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm43947-201ENSMUST00000203019 959 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm44100-201ENSMUST00000204329 436 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm8959-201ENSMUST00000213150 571 ntBASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scfd1Q8BRF7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm8956-201ENSMUST00000203939 825 ntBASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scfd1Q8BRF7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms