Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Gm26956-201ENSMUST00000182176 986 ntBASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Gm37201-201ENSMUST00000191845 523 ntBASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.63□□□□□ -0.39
Sfr1Q8BP27 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm24231-201ENSMUST00000104315 133 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm2991-201ENSMUST00000173338 480 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm44364-201ENSMUST00000198368 141 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm6007-201ENSMUST00000208170 823 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sfr1Q8BP27 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm12314-201ENSMUST00000118104 538 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm11597-201ENSMUST00000121423 964 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Mir8109-201ENSMUST00000184375 117 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm6621-201ENSMUST00000193251 772 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sfr1Q8BP27 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms