Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm24231-201ENSMUST00000104315 133 ntBASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Gm44958-201ENSMUST00000203734 736 ntBASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Smg1Q8BKX6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Gm6450-201ENSMUST00000200896 574 ntBASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Gm44814-201ENSMUST00000207018 434 ntBASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Smg1Q8BKX6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm9022-201ENSMUST00000182482 992 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm11511-201ENSMUST00000118146 540 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm22388-201ENSMUST00000158194 248 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms