Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.02□□□□□ -0.49
Trim50Q810I2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim50Q810I2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim50Q810I2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim50Q810I2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm4986-201ENSMUST00000119731 549 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm13297-201ENSMUST00000120205 934 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm25043-201ENSMUST00000158604 212 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trim50Q810I2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm37489-201ENSMUST00000191883 159 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm7399-201ENSMUST00000032395 858 ntBASIC12.01□□□□□ -0.49
Trim50Q810I2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim50Q810I2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim50Q810I2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12□□□□□ -0.49
Trim50Q810I2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm15370-201ENSMUST00000117158 253 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm13570-201ENSMUST00000140763 309 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12□□□□□ -0.49
Trim50Q810I2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm44974-201ENSMUST00000206387 1279 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12□□□□□ -0.49
Trim50Q810I2 Gm18935-201ENSMUST00000212692 664 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Gm5950-201ENSMUST00000213337 772 ntBASIC12□□□□□ -0.49
Trim50Q810I2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim50Q810I2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms