Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm18734-201ENSMUST00000172937 808 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm18304-201ENSMUST00000189162 546 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm7848-201ENSMUST00000210739 718 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.8□□□□□ -0.52
Vrk1Q80X41 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vrk1Q80X41 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm23949-201ENSMUST00000104027 127 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm13611-201ENSMUST00000118269 318 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm12380-201ENSMUST00000119012 544 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm28071-201ENSMUST00000190355 478 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Spcs1-203ENSMUST00000226374 592 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Gm9996-201ENSMUST00000070359 913 ntBASIC11.79□□□□□ -0.52
Vrk1Q80X41 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vrk1Q80X41 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vrk1Q80X41 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.78□□□□□ -0.52
Vrk1Q80X41 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.78□□□□□ -0.52
Vrk1Q80X41 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vrk1Q80X41 Gm9062-201ENSMUST00000117712 727 ntBASIC11.78□□□□□ -0.52
Vrk1Q80X41 Gm15711-201ENSMUST00000118889 535 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms