Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Gm22323-201ENSMUST00000103832 109 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Gm14109-201ENSMUST00000118814 309 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Gm13350-201ENSMUST00000120519 479 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Gm27046-201ENSMUST00000182160 463 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Gm8885-201ENSMUST00000189382 598 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf139Q7TMV1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm20482-202ENSMUST00000174729 825 ntBASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm27390-201ENSMUST00000184516 176 ntBASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf139Q7TMV1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.15□□□□□ -0.3
Rnf139Q7TMV1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms