Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trappc6aQ78XR0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm24891-201ENSMUST00000104391 136 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm7851-201ENSMUST00000117574 323 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm5733-201ENSMUST00000190232 939 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trappc6aQ78XR0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm4482-201ENSMUST00000200876 742 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6aQ78XR0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms