Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Gm14719-201ENSMUST00000121891 340 ntBASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf220Q6PDX6 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gm29608-201ENSMUST00000190444 463 ntBASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gm8227-201ENSMUST00000223306 571 ntBASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf220Q6PDX6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Gm22189-201ENSMUST00000103822 86 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Gm44872-201ENSMUST00000207864 420 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.67□□□□□ -0.54
Rnf220Q6PDX6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms