Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Gm5641-201ENSMUST00000091130 1488 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Gm5257-201ENSMUST00000121823 790 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Gm18776-201ENSMUST00000188833 654 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Gm45592-201ENSMUST00000209605 1043 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm4900-201ENSMUST00000222046 1628 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 AC130823.1-201ENSMUST00000228929 1549 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm9034-201ENSMUST00000182071 1005 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm42779-201ENSMUST00000198807 406 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm40879-201ENSMUST00000220759 612 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC18.62■□□□□ 0.57
Slx4Q6P1D7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slx4Q6P1D7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm14892-201ENSMUST00000117636 267 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm20414-201ENSMUST00000172918 646 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm6108-201ENSMUST00000208365 367 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 AC098716.1-201ENSMUST00000213527 703 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Lgi3-203ENSMUST00000226548 1001 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm8894-201ENSMUST00000074642 666 ntBASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slx4Q6P1D7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 AC153962.2-201ENSMUST00000219417 550 ntBASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms